WormBase Tree Display for Variation: WBVar01622397
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WBVar01622397 | Name | Public_name | WBVar01622397 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00302195 | |||||||
R07D5.1g.1:c.18+3329A>G | ||||||||
R07D5.1h.1:c.57+504A>G | ||||||||
R07D5.1e.1:c.268-4074A>G | ||||||||
R07D5.1c.1:c.-165-4074A>G | ||||||||
R07D5.1i.1:c.57+504A>G | ||||||||
R07D5.1a.1:c.-8-3667A>G | ||||||||
R07D5.1d.1:c.268-4074A>G | ||||||||
R07D5.1f.1:c.18+3329A>G | ||||||||
HGVSg | CHROMOSOME_X:g.15131249T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | R07D5 | ||||
Flanking_sequences | AAGGAGAAAAGAAAACCCCCTATTTTTTGG | TTTCCTGCCCCTAAAATCATATACATTTTG | ||||||
Mapping_target | R07D5 | |||||||
Source_location | 225 | CHROMOSOME_X | 15131179 | 15131179 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006747 | ||||||
Transcript | R07D5.1i.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1i.1:c.57+504A>G | |||||||
Intron_number | 2/11 | |||||||
R07D5.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1f.1:c.18+3329A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1h.1:c.57+504A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1c.1:c.-165-4074A>G | |||||||
Intron_number | 1/11 | |||||||
R07D5.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1a.1:c.-8-3667A>G | |||||||
Intron_number | 1/12 | |||||||
R07D5.1g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1g.1:c.18+3329A>G | |||||||
Intron_number | 2/11 | |||||||
R07D5.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1d.1:c.268-4074A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1e.1:c.268-4074A>G | |||||||
Intron_number | 1/10 | |||||||
Method | WGS_Flibotte |