WormBase Tree Display for Variation: WBVar01627143
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WBVar01627143 | Name | Public_name | WBVar01627143 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00307358 | |||||||
F52H3.1.3:c.-3-36A>T | ||||||||
F52H3.1.2:c.-3-36A>T | ||||||||
F52H3.1.1:c.-3-36A>T | ||||||||
HGVSg | CHROMOSOME_II:g.10038156T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F52H3 | ||||
Flanking_sequences | AAAACCAATTATAGAAATTGAAAAAAAATA | ATATATAAATCAATGAATATTGTAAACGGA | ||||||
Mapping_target | F52H3 | |||||||
Source_location | 225 | CHROMOSOME_II | 10038097 | 10038097 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002497 | ||||||
Transcript | F52H3.1.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F52H3.1.3:c.-3-36A>T | |||||||
Intron_number | 1/11 | |||||||
F52H3.1.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F52H3.1.1:c.-3-36A>T | |||||||
Intron_number | 1/11 | |||||||
F52H3.1.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F52H3.1.2:c.-3-36A>T | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |