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WormBase Tree Display for Variation: WBVar01630131

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Name Class

WBVar01630131NamePublic_nameWBVar01630131
Other_namecewivar00311705
Y54G2A.17b.1:c.1239+784G>A
Y54G2A.17a.3:c.1179+784G>A
Y54G2A.17a.2:c.1179+784G>A
Y54G2A.17a.1:c.1179+784G>A
HGVSgCHROMOSOME_IV:g.2878478C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCAAGTAAAAAAATCATGTATTCAGTGGGCAAGCAGCGGTGAAAGTGGGCATGTAATATGATGGATTACGGAAATACAAAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28784762878476From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1179+784G>A
Intron_number4/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1239+784G>A
Intron_number5/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1179+784G>A
Intron_number5/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1179+784G>A
Intron_number5/8
MethodWGS_Flibotte