WormBase Tree Display for Variation: WBVar01630321
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WBVar01630321 | Name | Public_name | WBVar01630321 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00311907 | |||||||
CE21557:p.Asp154Val | ||||||||
Y37E11C.1a.1:c.461A>T | ||||||||
HGVSg | CHROMOSOME_IV:g.3518082A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y37E11C | ||||
Flanking_sequences | TCTTCAATTTTTTTGATTTTCAGCCATCCG | TCGTGTTGTAAGCAATGCTAAACTCTCTCA | ||||||
Mapping_target | Y37E11C | |||||||
Source_location | 225 | CHROMOSOME_IV | 3518079 | 3518079 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006769 | ||||||
Transcript | Y37E11C.1a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0 | deleterious | ||||||
PolyPhen | 0.993 | probably_damaging | ||||||
HGVSc | Y37E11C.1a.1:c.461A>T | |||||||
HGVSp | CE21557:p.Asp154Val | |||||||
cDNA_position | 461 | |||||||
CDS_position | 461 | |||||||
Protein_position | 154 | |||||||
Exon_number | 5/11 | |||||||
Codon_change | gAt/gTt | |||||||
Amino_acid_change | D/V | |||||||
Method | WGS_Flibotte |