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WormBase Tree Display for Variation: WBVar01677911

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WBVar01677911	Name	Public_name	WBVar01677911
		Other_name	cewivar00368137
			T28F12.2c.2:c.-1186G>A
			T28F12.2h.1:c.138G>A
			CE33585:p.Thr120=
			T28F12.2d.2:c.-1006G>A
			T28F12.2f.1:c.360G>A
			T28F12.2a.1:c.360G>A
			T28F12.2d.4:c.-988G>A
			T28F12.2c.1:c.-1570G>A
			CE50189:p.Thr46=
			T28F12.2e.1:c.249G>A
			CE37795:p.Thr46=
			CE33584:p.Thr83=
			T28F12.2d.1:c.-988G>A
			T28F12.2d.5:c.-1000G>A
			CE21220:p.Thr83=
			T28F12.2b.1:c.249G>A
			CE21219:p.Thr120=
			T28F12.2d.3:c.-1006G>A
			T28F12.2g.1:c.138G>A
		HGVSg	CHROMOSOME_V:g.4501773G>A
	Sequence_details	SMap	S_parent	Sequence	T28F12
		Flanking_sequences	TCTCCTATTCGAAAAATGCGAGCTCGCCAC	TCAACGCCCCGAGACACGTCACGCGACGGA
		Mapping_target	T28F12
		Source_location	225	CHROMOSOME_V	4501759	4501759	From_analysis	Million_mutation_project_reanalysis
		Type_of_mutation	Substitution	G	A
		SeqStatus	Sequenced
	Variation_type	Natural_variant
	Origin	Species	Caenorhabditis elegans
		Strain	WBStrain00006637	From_analysis	Million_mutation_project_reanalysis
			WBStrain00023072	From_analysis	Million_mutation_project_reanalysis
		Laboratory	VC
		Analysis	Million_mutation_project_reanalysis
		Status	Live
	Affects	Gene	WBGene00006796
		Transcript	T28F12.2h.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2h.1:c.138G>A
				HGVSp	CE50189:p.Thr46=
				cDNA_position	138
				CDS_position	138
				Protein_position	46
				Exon_number	2/9
				Codon_change	acG/acA
				Amino_acid_change	T
			T28F12.2e.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2e.1:c.249G>A
				HGVSp	CE33584:p.Thr83=
				cDNA_position	249
				CDS_position	249
				Protein_position	83
				Exon_number	3/10
				Codon_change	acG/acA
				Amino_acid_change	T
			T28F12.2d.4	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2d.4:c.-988G>A
				cDNA_position	569
				Exon_number	3/12
			T28F12.2d.1	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2d.1:c.-988G>A
				cDNA_position	364
				Exon_number	3/12
			T28F12.2a.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2a.1:c.360G>A
				HGVSp	CE21219:p.Thr120=
				cDNA_position	364
				CDS_position	360
				Protein_position	120
				Exon_number	4/12
				Codon_change	acG/acA
				Amino_acid_change	T
			T28F12.2b.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2b.1:c.249G>A
				HGVSp	CE21220:p.Thr83=
				cDNA_position	715
				CDS_position	249
				Protein_position	83
				Exon_number	4/12
				Codon_change	acG/acA
				Amino_acid_change	T
			T28F12.2d.2	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2d.2:c.-1006G>A
				cDNA_position	366
				Exon_number	3/12
			T28F12.2d.5	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2d.5:c.-1000G>A
				cDNA_position	244
				Exon_number	2/11
			T28F12.2c.1	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2c.1:c.-1570G>A
				cDNA_position	358
				Exon_number	3/11
			T28F12.2d.3	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2d.3:c.-1006G>A
				cDNA_position	718
				Exon_number	3/12
			T28F12.2g.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2g.1:c.138G>A
				HGVSp	CE37795:p.Thr46=
				cDNA_position	138
				CDS_position	138
				Protein_position	46
				Exon_number	2/9
				Codon_change	acG/acA
				Amino_acid_change	T
			T28F12.2c.2	VEP_consequence	5_prime_UTR_variant
				VEP_impact	MODIFIER
				HGVSc	T28F12.2c.2:c.-1186G>A
				cDNA_position	557
				Exon_number	3/11
			T28F12.2f.1	VEP_consequence	synonymous_variant
				VEP_impact	LOW
				HGVSc	T28F12.2f.1:c.360G>A
				HGVSp	CE33585:p.Thr120=
				cDNA_position	364
				CDS_position	360
				Protein_position	120
				Exon_number	4/11
				Codon_change	acG/acA
				Amino_acid_change	T
	Method	WGS_Flibotte