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WormBase Tree Display for Variation: WBVar01686405

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Name Class

WBVar01686405NamePublic_nameWBVar01686405
Other_namecewivar00377849
F53A3.4c.1:c.3196-269C>G
F53A3.4b.1:c.3196-269C>G
F53A3.4a.1:c.3196-269C>G
F53A3.4d.1:c.-1671-269C>G
HGVSgCHROMOSOME_III:g.1927408C>G
Sequence_detailsSMapS_parentSequenceF53A3
Flanking_sequencesTCATCACTTTTCACCCATAACTGGCTTTTTCTGGCATTCTAACTCAAATTTTGAATTTCC
Mapping_targetF53A3
Source_location225CHROMOSOME_III19273991927399From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004128
TranscriptF53A3.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.1:c.-1671-269C>G
Intron_number1/11
F53A3.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4c.1:c.3196-269C>G
Intron_number14/16
F53A3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4b.1:c.3196-269C>G
Intron_number14/23
F53A3.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4a.1:c.3196-269C>G
Intron_number15/23
MethodWGS_Flibotte