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WormBase Tree Display for Variation: WBVar01686415

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Name Class

WBVar01686415NamePublic_nameWBVar01686415
Other_namecewivar00377860
F53A3.4a.1:c.3837-500C>T
F53A3.4c.1:c.3837-500C>T
F53A3.4d.2:c.-1030-500C>T
F53A3.4d.1:c.-1030-500C>T
F53A3.4b.1:c.3837-500C>T
F53A3.4d.3:c.-979-500C>T
HGVSgCHROMOSOME_III:g.1930238C>T
Sequence_detailsSMapS_parentSequenceF53A3
Flanking_sequencesTTTCGAGTTCCTCGTCATTTTTCACTCCGGAACCTTTTTTTAGTGGCACTGACATCAAAA
Mapping_targetF53A3
Source_location225CHROMOSOME_III19302291930229From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00305433
WBGene00004128
TranscriptF53A3.4d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.2:c.-1030-500C>T
Intron_number2/10
F53A3.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.1:c.-1030-500C>T
Intron_number3/11
F53A3.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4c.1:c.3837-500C>T
Intron_number16/16
F53A3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4b.1:c.3837-500C>T
Intron_number16/23
F53A3.12
F53A3.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4a.1:c.3837-500C>T
Intron_number17/23
F53A3.4d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.3:c.-979-500C>T
Intron_number2/10
MethodWGS_Flibotte