WormBase Tree Display for Variation: WBVar01686418

WBVar01686418 Name: Public_name: WBVar01686418
    Other_name: cewivar00377863
      CE44055:p.Gly1316=
      F53A3.4d.1:c.-919G>A
      CE44091:p.Gly1316=
      F53A3.4c.1:c.3948G>A
      CE44019:p.Gly1316=
      F53A3.4b.1:c.3948G>A
      F53A3.4d.2:c.-919G>A
      F53A3.4d.3:c.-868G>A
      F53A3.4a.1:c.3948G>A
    HGVSg: CHROMOSOME_III:g.1930849G>A
  Sequence_details: SMap: S_parent: Sequence: F53A3
    Flanking_sequences: AACCACCAGCGGAGGAGCCGGCCTAATCGG ATCTCAGCAGCAACTCAGGCTCAACTTCAA
    Mapping_target: F53A3
    Source_location: 225 CHROMOSOME_III 1930840 1930840 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00305433
      WBGene00004128
    Transcript: F53A3.4d.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4d.2:c.-919G>A
        cDNA_position: 759
        Exon_number: 3/11
      F53A3.4d.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4d.1:c.-919G>A
        cDNA_position: 1083
        Exon_number: 4/12
      F53A3.4c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F53A3.4c.1:c.3948G>A
        HGVSp: CE44091:p.Gly1316=
        cDNA_position: 3948
        CDS_position: 3948
        Protein_position: 1316
        Exon_number: 17/17
        Codon_change: ggG/ggA
        Amino_acid_change: G
      F53A3.4b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F53A3.4b.1:c.3948G>A
        HGVSp: CE44055:p.Gly1316=
        cDNA_position: 3948
        CDS_position: 3948
        Protein_position: 1316
        Exon_number: 17/24
        Codon_change: ggG/ggA
        Amino_acid_change: G
      F53A3.12
      F53A3.4a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F53A3.4a.1:c.3948G>A
        HGVSp: CE44019:p.Gly1316=
        cDNA_position: 3957
        CDS_position: 3948
        Protein_position: 1316
        Exon_number: 18/24
        Codon_change: ggG/ggA
        Amino_acid_change: G
      F53A3.4d.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4d.3:c.-868G>A
        cDNA_position: 755
        Exon_number: 3/11
  Method: WGS_Flibotte