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WormBase Tree Display for Variation: WBVar01701800

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Name Class

WBVar01701800NamePublic_nameWBVar01701800
Other_namecewivar00399123
Y39A1A.21a.1:c.235-1055A>G
Y39A1A.22.1:c.*229A>G
Y39A1A.21a.2:c.235-1055A>G
HGVSgCHROMOSOME_III:g.10703580T>C
Sequence_detailsSMapS_parentSequenceY39A1A
Flanking_sequencesGGACGGGTAGGCCTTCCACGTAGGCATAAAACCTACACGCCTGCCTACAAAAGGTGAGCA
Mapping_targetY39A1A
Source_location225CHROMOSOME_III1070348110703481From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012659
WBGene00012658
TranscriptY39A1A.21a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A1A.21a.1:c.235-1055A>G
Intron_number3/6
Y39A1A.21a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A1A.21a.2:c.235-1055A>G
Intron_number2/5
Y39A1A.22.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY39A1A.22.1:c.*229A>G
cDNA_position2435
Exon_number4/4
MethodWGS_Flibotte