WormBase Tree Display for Variation: WBVar01701800
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WBVar01701800 | Name | Public_name | WBVar01701800 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00399123 | |||||||
Y39A1A.21a.1:c.235-1055A>G | ||||||||
Y39A1A.22.1:c.*229A>G | ||||||||
Y39A1A.21a.2:c.235-1055A>G | ||||||||
HGVSg | CHROMOSOME_III:g.10703580T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39A1A | ||||
Flanking_sequences | GGACGGGTAGGCCTTCCACGTAGGCATAAA | ACCTACACGCCTGCCTACAAAAGGTGAGCA | ||||||
Mapping_target | Y39A1A | |||||||
Source_location | 225 | CHROMOSOME_III | 10703481 | 10703481 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012659 | ||||||
WBGene00012658 | ||||||||
Transcript | Y39A1A.21a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.21a.1:c.235-1055A>G | |||||||
Intron_number | 3/6 | |||||||
Y39A1A.21a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.21a.2:c.235-1055A>G | |||||||
Intron_number | 2/5 | |||||||
Y39A1A.22.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.22.1:c.*229A>G | |||||||
cDNA_position | 2435 | |||||||
Exon_number | 4/4 | |||||||
Method | WGS_Flibotte |