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WormBase Tree Display for Variation: WBVar01702885

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Name Class

WBVar01702885NamePublic_nameWBVar01702885
Other_namecewivar00400230
Y54G2A.17a.1:c.1360C>T
CE46281:p.Pro474Ser
Y54G2A.17a.3:c.1360C>T
Y54G2A.17a.2:c.1360C>T
CE46116:p.Pro454Ser
Y54G2A.17b.1:c.1420C>T
HGVSgCHROMOSOME_IV:g.2875203G>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGTTTTTCCATCAAATTAACCACCTCAAACGATGCCTGCAAAGAATCTGTTGATTGGGTTG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28752012875201From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00008273From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY54G2A.17a.3:c.1360C>T
HGVSpCE46116:p.Pro454Ser
cDNA_position1405
CDS_position1360
Protein_position454
Exon_number5/8
Codon_changeCcg/Tcg
Amino_acid_changeP/S
Y54G2A.17b.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY54G2A.17b.1:c.1420C>T
HGVSpCE46281:p.Pro474Ser
cDNA_position1456
CDS_position1420
Protein_position474
Exon_number6/8
Codon_changeCcg/Tcg
Amino_acid_changeP/S
Y54G2A.17a.2VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY54G2A.17a.2:c.1360C>T
HGVSpCE46116:p.Pro454Ser
cDNA_position1501
CDS_position1360
Protein_position454
Exon_number6/9
Codon_changeCcg/Tcg
Amino_acid_changeP/S
Y54G2A.17a.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY54G2A.17a.1:c.1360C>T
HGVSpCE46116:p.Pro454Ser
cDNA_position1450
CDS_position1360
Protein_position454
Exon_number6/9
Codon_changeCcg/Tcg
Amino_acid_changeP/S
MethodWGS_Flibotte