WormBase Tree Display for Variation: WBVar01706674
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WBVar01706674 | Name | Public_name | WBVar01706674 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00404168 | |||||||
BE0003N10.1.1:c.1242+501T>A | ||||||||
BE0003N10.t3.1:n.21T>A | ||||||||
HGVSg | CHROMOSOME_III:g.1042606T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | BE0003N10 | ||||
Flanking_sequences | TTTGAAACTTGCACCGGTGGCTCAGTTGGT | ACACGGATGGCTGCCAAGCACAAGACCAGG | ||||||
Mapping_target | BE0003N10 | |||||||
Source_location | 225 | CHROMOSOME_III | 1042596 | 1042596 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00023229 | ||||||
WBGene00015266 | ||||||||
Transcript | BE0003N10.1.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | BE0003N10.1.1:c.1242+501T>A | |||||||
Intron_number | 7/11 | |||||||
Pseudogene | BE0003N10.t3 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | BE0003N10.t3.1:n.21T>A | |||||||
cDNA_position | 21 | |||||||
Exon_number | 1/1 | |||||||
Method | WGS_Flibotte |