WormBase Tree Display for Variation: WBVar01706803
expand all nodes | collapse all nodes | view schema
WBVar01706803 | Name | Public_name | WBVar01706803 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00404301 | |||||||
CE50245:p.Gly182= | ||||||||
BE0003N10.3a.1:c.732T>A | ||||||||
BE0003N10.3b.1:c.546T>A | ||||||||
CE50179:p.Gly244= | ||||||||
HGVSg | CHROMOSOME_III:g.1051892A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | BE0003N10 | ||||
Flanking_sequences | CTTGACAACTACAGTATGACTGTCAGCATT | CCAGACTGAAAATTGCAGTGCTCAATGATG | ||||||
Mapping_target | BE0003N10 | |||||||
Source_location | 225 | CHROMOSOME_III | 1051882 | 1051882 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015268 | ||||||
Transcript | BE0003N10.3b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | BE0003N10.3b.1:c.546T>A | |||||||
HGVSp | CE50245:p.Gly182= | |||||||
cDNA_position | 546 | |||||||
CDS_position | 546 | |||||||
Protein_position | 182 | |||||||
Exon_number | 2/8 | |||||||
Codon_change | ggT/ggA | |||||||
Amino_acid_change | G | |||||||
BE0003N10.3a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | BE0003N10.3a.1:c.732T>A | |||||||
HGVSp | CE50179:p.Gly244= | |||||||
cDNA_position | 732 | |||||||
CDS_position | 732 | |||||||
Protein_position | 244 | |||||||
Exon_number | 3/10 | |||||||
Codon_change | ggT/ggA | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |