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WormBase Tree Display for Variation: WBVar01708279

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Name Class

WBVar01708279NamePublic_nameWBVar01708279
Other_namecewivar00405832
F53A3.4d.1:c.39-39T>A
F53A3.4b.1:c.4905-39T>A
F53A3.4a.1:c.4800-39T>A
F53A3.4d.3:c.39-39T>A
F53A3.4d.2:c.39-39T>A
HGVSgCHROMOSOME_III:g.1934145T>A
Sequence_detailsSMapS_parentSequenceF53A3
Flanking_sequencesGTGAAAATGCCTAGTTTTTGAGTTTTCCTAAAAAAATTTGAAAGTTTTCAAAATTTGAAA
Mapping_targetF53A3
Source_location225CHROMOSOME_III19341361934136From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004128
TranscriptF53A3.4d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.2:c.39-39T>A
Intron_number6/10
F53A3.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.1:c.39-39T>A
Intron_number7/11
F53A3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4b.1:c.4905-39T>A
Intron_number19/23
F53A3.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4a.1:c.4800-39T>A
Intron_number19/23
F53A3.4d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.3:c.39-39T>A
Intron_number6/10
MethodWGS_Flibotte