WormBase Tree Display for Variation: WBVar01711003
expand all nodes | collapse all nodes | view schema
WBVar01711003 | Name | Public_name | WBVar01711003 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00408672 | |||||||
R08E3.1b.1:c.*143A>G | ||||||||
R08E3.1b.2:c.*143A>G | ||||||||
CE51999:p.Lys1929Arg | ||||||||
R08E3.1a.1:c.5786A>G | ||||||||
HGVSg | CHROMOSOME_X:g.4834203A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | R08E3 | ||||
Flanking_sequences | AAACGAATGTAATAAATATTCTATACGAGA | GCTTTGCCAGTAAGATTTTTTTTTGGAAAA | ||||||
Mapping_target | R08E3 | |||||||
Source_location | 225 | CHROMOSOME_X | 4834173 | 4834173 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019957 | ||||||
Transcript | R08E3.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R08E3.1b.1:c.*143A>G | |||||||
cDNA_position | 5849 | |||||||
Exon_number | 47/48 | |||||||
R08E3.1b.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R08E3.1b.2:c.*143A>G | |||||||
cDNA_position | 5841 | |||||||
Exon_number | 47/47 | |||||||
R08E3.1a.1 (12) | ||||||||
Method | WGS_Flibotte |