WormBase Tree Display for Variation: WBVar01719889
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WBVar01719889 | Name | Public_name | WBVar01719889 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00418024 | |||||||
F59E12.6b.1:c.343-27T>G | ||||||||
F59E12.6a.2:c.484-27T>G | ||||||||
F59E12.6a.1:c.484-27T>G | ||||||||
F59E12.16c.1:n.931-27T>G | ||||||||
HGVSg | CHROMOSOME_II:g.5628776A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F59E12 | ||||
Flanking_sequences | GAACCTGTAAATATAGTTGAATTATTTAAA | ACCACAGAAACTCAGTTTTTGTAGTAGAAA | ||||||
Mapping_target | F59E12 | |||||||
Source_location | 225 | CHROMOSOME_II | 5628758 | 5628758 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00305468 | ||||||
WBGene00019122 | ||||||||
WBGene00235270 | ||||||||
Transcript | F59E12.6a.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F59E12.6a.2:c.484-27T>G | |||||||
Intron_number | 3/5 | |||||||
F59E12.18 | ||||||||
F59E12.6b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F59E12.6b.1:c.343-27T>G | |||||||
Intron_number | 4/5 | |||||||
F59E12.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F59E12.6a.1:c.484-27T>G | |||||||
Intron_number | 6/8 | |||||||
Pseudogene | F59E12.16c | VEP_consequence | intron_variant,non_coding_transcript_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F59E12.16c.1:n.931-27T>G | |||||||
Intron_number | 4/7 | |||||||
Method | WGS_Flibotte |