WormBase Tree Display for Variation: WBVar01723357
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WBVar01723357 | Name | Public_name | WBVar01723357 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00421636 | |||||||
CE25119:p.Arg453Gln | ||||||||
T20G5.6.1:c.1358G>A | ||||||||
HGVSg | CHROMOSOME_III:g.10184025C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T20G5 | ||||
Flanking_sequences | TATTGTATTATTCCGAATATTATATCTTAC | GTTTTTCAAAATTATTGAGAGTTTTTTCTT | ||||||
Mapping_target | T20G5 | |||||||
Source_location | 225 | CHROMOSOME_III | 10183934 | 10183934 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006783 | ||||||
Transcript | T20G5.6.1 | VEP_consequence | missense_variant,splice_region_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.29 | tolerated | ||||||
PolyPhen | 0.782 | possibly_damaging | ||||||
HGVSc | T20G5.6.1:c.1358G>A | |||||||
HGVSp | CE25119:p.Arg453Gln | |||||||
cDNA_position | 1358 | |||||||
CDS_position | 1358 | |||||||
Protein_position | 453 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | cGa/cAa | |||||||
Amino_acid_change | R/Q | |||||||
Method | WGS_Flibotte |