WormBase Tree Display for Variation: WBVar01726607
expand all nodes | collapse all nodes | view schema
WBVar01726607 | Name | Public_name | WBVar01726607 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00424982 | |||||||
Y54G2A.33.2:c.214+1058T>G | ||||||||
Y54G2A.33.1:c.214+1058T>G | ||||||||
Y54G2A.15.1:c.156+16A>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2843746T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AACATAGGCGGTGCGTTGCGGTCGCGTTAT | GTCAAATTATTTTACCATCCAAGTATAAGC | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2843744 | 2843744 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021880 | ||||||
WBGene00021895 | ||||||||
Transcript | Y54G2A.33.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.33.1:c.214+1058T>G | |||||||
Intron_number | 2/4 | |||||||
Y54G2A.33.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.33.2:c.214+1058T>G | |||||||
Intron_number | 2/3 | |||||||
Y54G2A.15.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.15.1:c.156+16A>C | |||||||
Intron_number | 3/6 | |||||||
Method | WGS_Flibotte |