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WormBase Tree Display for Variation: WBVar01726642

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Name Class

WBVar01726642NamePublic_nameWBVar01726642
Other_namecewivar00425019
Y54G2A.17a.2:c.830-542T>C
Y54G2A.17b.1:c.890-542T>C
Y54G2A.17a.3:c.830-542T>C
Y54G2A.17a.1:c.830-542T>C
HGVSgCHROMOSOME_IV:g.2880153A>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTTTAACATTAAAAAAAACCAACTTTTTCGCATTTTTTTCAATTTTATGCTCTAAATTA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28801512880151From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.830-542T>C
Intron_number3/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.890-542T>C
Intron_number4/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.830-542T>C
Intron_number4/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.830-542T>C
Intron_number4/8
MethodWGS_Flibotte