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WormBase Tree Display for Variation: WBVar01726650

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Name Class

WBVar01726650NamePublic_nameWBVar01726650
Other_namecewivar00425027
Y54G2A.36.2:c.-294-17A>G
Y54G2A.36.1:c.-311A>G
Y54G2A.36.4:c.-248-17A>G
Y54G2A.36.3:c.-283-28A>G
Y54G2A.36.5:c.-311A>G
HGVSgCHROMOSOME_IV:g.2900882A>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAAAATTAATACCGTTTTTCAGGAGTTCCGTAAGTTTATTCTTTTAGCCATTTTCAAGGTT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV29008802900880From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021898
TranscriptY54G2A.36.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.2:c.-294-17A>G
Intron_number1/4
Y54G2A.36.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.1:c.-311A>G
cDNA_position117
Exon_number2/5
Y54G2A.36.5VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.5:c.-311A>G
cDNA_position2779
Exon_number1/4
Y54G2A.36.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.4:c.-248-17A>G
Intron_number1/5
Y54G2A.36.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.3:c.-283-28A>G
Intron_number1/4
MethodWGS_Flibotte