WormBase Tree Display for Variation: WBVar01726652
expand all nodes | collapse all nodes | view schema
WBVar01726652 | Name | Public_name | WBVar01726652 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00425029 | |||||||
Y54G2A.21:n.2810-220C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2902951G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTACTGACTGAAAAAATAGCTACATTCGCACTTTTGTCTTTTTGACTACT | AATGTCTTTTTCGCTACTGACTGAAAAATAGCGGCAAACA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2902949 | 2902949 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021886 | ||||||
Pseudogene | Y54G2A.21 | VEP_consequence | intron_variant,non_coding_transcript_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.21:n.2810-220C>T | |||||||
Intron_number | 7/8 | |||||||
Method | WGS_Flibotte |