WormBase Tree Display for Variation: WBVar01726702
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WBVar01726702 | Name | Public_name | WBVar01726702 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00425080 | |||||||
Y54G2A.25a.1:c.1428+867C>T | ||||||||
Y54G2A.57.1:c.1135+221G>A | ||||||||
Y54G2A.25b.1:c.1429-66C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2972594G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTTGAAGGAATGCCTAAATGCTTACCTAGG | CACTGCAAATTCATATCAACTACCTACTTT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2972592 | 2972592 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002243 | ||||||
WBGene00189961 | ||||||||
Transcript | Y54G2A.25b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.25b.1:c.1429-66C>T | |||||||
Intron_number | 9/11 | |||||||
Y54G2A.25a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.25a.1:c.1428+867C>T | |||||||
Intron_number | 10/23 | |||||||
Y54G2A.57.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.57.1:c.1135+221G>A | |||||||
Intron_number | 10/11 | |||||||
Method | WGS_Flibotte |