WormBase Tree Display for Variation: WBVar01794588
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WBVar01794588 | Name | Public_name | WBVar01794588 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00496948 | |||||||
Y54G2A.39b.1:c.937A>C | ||||||||
CE27497:p.Ile313Leu | ||||||||
HGVSg | CHROMOSOME_IV:g.2827924A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CACCTACTCCTCCTTTGGTACAGTAGTCGGAGTACTGGTTGGTGGAGCCACTTCAATTCCTGGGCTCTCA | TTGACACAAATGTGATTGCTGCTCCAGCGT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2827922 | 2827922 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00043062 | ||||||
Transcript | Y54G2A.39b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.09 | tolerated_low_confidence | ||||||
PolyPhen | 0.186 | benign | ||||||
HGVSc | Y54G2A.39b.1:c.937A>C | |||||||
HGVSp | CE27497:p.Ile313Leu | |||||||
cDNA_position | 941 | |||||||
CDS_position | 937 | |||||||
Protein_position | 313 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | Att/Ctt | |||||||
Amino_acid_change | I/L | |||||||
Method | WGS_Flibotte |