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WormBase Tree Display for Variation: WBVar01804672

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Name Class

WBVar01804672NamePublic_nameWBVar01804672
Other_namecewivar00515546
F58D2.2.1:c.576A>T
CE42623:p.Ser192=
F58D2.5.1:c.59-1334T>A
HGVSgCHROMOSOME_IV:g.13190783A>T
Sequence_detailsSMapS_parentSequenceF58D2
Flanking_sequencesGCTCTTTCAGGGCTCCACTCCGACTAGCTCATCCTGTTTGCTAACGAAGGAAACTGCTAT
Mapping_targetF58D2
Source_location225CHROMOSOME_IV1319075913190759From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00206469
WBGene00010241
TranscriptF58D2.2.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF58D2.2.1:c.576A>T
HGVSpCE42623:p.Ser192=
cDNA_position648
CDS_position576
Protein_position192
Exon_number4/8
Codon_changetcA/tcT
Amino_acid_changeS
F58D2.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58D2.5.1:c.59-1334T>A
Intron_number2/3
MethodWGS_Flibotte