WormBase Tree Display for Variation: WBVar01804672
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WBVar01804672 | Name | Public_name | WBVar01804672 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00515546 | |||||||
F58D2.2.1:c.576A>T | ||||||||
CE42623:p.Ser192= | ||||||||
F58D2.5.1:c.59-1334T>A | ||||||||
HGVSg | CHROMOSOME_IV:g.13190783A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F58D2 | ||||
Flanking_sequences | GCTCTTTCAGGGCTCCACTCCGACTAGCTC | ATCCTGTTTGCTAACGAAGGAAACTGCTAT | ||||||
Mapping_target | F58D2 | |||||||
Source_location | 225 | CHROMOSOME_IV | 13190759 | 13190759 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00206469 | ||||||
WBGene00010241 | ||||||||
Transcript | F58D2.2.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F58D2.2.1:c.576A>T | |||||||
HGVSp | CE42623:p.Ser192= | |||||||
cDNA_position | 648 | |||||||
CDS_position | 576 | |||||||
Protein_position | 192 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | tcA/tcT | |||||||
Amino_acid_change | S | |||||||
F58D2.5.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F58D2.5.1:c.59-1334T>A | |||||||
Intron_number | 2/3 | |||||||
Method | WGS_Flibotte |