WormBase Tree Display for Variation: WBVar01817024
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WBVar01817024 | Name | Public_name | WBVar01817024 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00528469 | |||||||
F16H9.2a.1:c.-23-14773T>C | ||||||||
F16H9.1c.1:c.-319A>G | ||||||||
F16H9.1b.1:c.84-3563A>G | ||||||||
F16H9.1a.1:c.-7A>G | ||||||||
F16H9.2b.1:c.35-14773T>C | ||||||||
HGVSg | CHROMOSOME_X:g.12722076A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F16H9 | ||||
Flanking_sequences | AACACCACCAGTGCTTGTCGAAGGCACACA | AACCTTATGCGGTTACTGACGTGTGACTGT | ||||||
Mapping_target | F16H9 | |||||||
Source_location | 225 | CHROMOSOME_X | 12722005 | 12722005 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008901 | ||||||
WBGene00004345 | ||||||||
Transcript | F16H9.1a.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1a.1:c.-7A>G | |||||||
cDNA_position | 266 | |||||||
Exon_number | 1/7 | |||||||
F16H9.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2b.1:c.35-14773T>C | |||||||
Intron_number | 1/3 | |||||||
F16H9.1c.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1c.1:c.-319A>G | |||||||
cDNA_position | 3 | |||||||
Exon_number | 1/7 | |||||||
F16H9.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2a.1:c.-23-14773T>C | |||||||
Intron_number | 1/4 | |||||||
F16H9.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1b.1:c.84-3563A>G | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |