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WormBase Tree Display for Variation: WBVar01817392

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Name Class

WBVar01817392NamePublic_nameWBVar01817392
Other_namecewivar00528858
Y54E10BL.6.1:c.486+1182A>T
Y54E10BL.2.1:c.*55T>A
HGVSgCHROMOSOME_I:g.3011662T>A
Sequence_detailsSMapS_parentSequenceY54E10BL
Flanking_sequencesATTTTCGAATAAACTATATTATTTTTTCAACGATATGTCGTAGTTGTCCATTTAATAAAA
Mapping_targetY54E10BL
Source_location225CHROMOSOME_I30116643011664From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003186
WBGene00000625
TranscriptY54E10BL.2.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54E10BL.2.1:c.*55T>A
cDNA_position919
Exon_number4/4
Y54E10BL.6.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10BL.6.1:c.486+1182A>T
Intron_number4/8
MethodWGS_Flibotte