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WormBase Tree Display for Variation: WBVar01830380

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Name Class

WBVar01830380NamePublic_nameWBVar01830380
Other_namecewivar00542491
R08E3.1b.2:c.*313T>C
R08E3.1a.1:c.5795+161T>C
R08E3.1b.1:c.*152+161T>C
HGVSgCHROMOSOME_X:g.4834373T>C
Sequence_detailsSMapS_parentSequenceR08E3
Flanking_sequencesGACATTTTCTCGACCAAAAAATCAATGTTTCCTTAAAAAACCAAAACTTTCTCACAAAAA
Mapping_targetR08E3
Source_location225CHROMOSOME_X48343434834343From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022886From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00019957
TranscriptR08E3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.1b.1:c.*152+161T>C
Intron_number47/47
R08E3.1b.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScR08E3.1b.2:c.*313T>C
cDNA_position6011
Exon_number47/47
R08E3.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.1a.1:c.5795+161T>C
Intron_number47/48
MethodWGS_Flibotte