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WormBase Tree Display for Variation: WBVar01831772

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Name Class

WBVar01831772NamePublic_nameWBVar01831772
Other_namecewivar00543975
Y54G2A.17a.2:c.1552-187G>A
Y54G2A.17a.1:c.1552-187G>A
Y54G2A.17a.3:c.1552-187G>A
Y54G2A.17b.1:c.1612-187G>A
HGVSgCHROMOSOME_IV:g.2872488C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTGCCGAAAATTTTCAATTCCTGCAATTTGCGATTTGCCGAATATTTTCAATTCCGGCAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28724862872486From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1552-187G>A
Intron_number6/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1612-187G>A
Intron_number7/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1552-187G>A
Intron_number7/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1552-187G>A
Intron_number7/8
MethodWGS_Flibotte