WormBase Tree Display for Variation: WBVar01837145
expand all nodes | collapse all nodes | view schema
WBVar01837145 | Name | Public_name | WBVar01837145 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00549577 | |||||||
Y39A3B.5d.1:c.113+469A>G | ||||||||
Y39A3B.5b.1:c.113+469A>G | ||||||||
Y39A3B.5e.1:c.-14+469A>G | ||||||||
Y39A3B.5a.1:c.-14+469A>G | ||||||||
HGVSg | CHROMOSOME_III:g.2020998T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | M01E10 | ||||
Flanking_sequences | TCGAGAATTTTAGATGGTTTTAACCTAAAA | GTGTAAAATTTAATTGACTAAATGCTCGAA | ||||||
Mapping_target | M01E10 | |||||||
Source_location | 225 | CHROMOSOME_III | 2020988 | 2020988 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021439 | ||||||
Transcript | Y39A3B.5d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5d.1:c.113+469A>G | |||||||
Intron_number | 2/14 | |||||||
Y39A3B.5b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5b.1:c.113+469A>G | |||||||
Intron_number | 1/12 | |||||||
Y39A3B.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5e.1:c.-14+469A>G | |||||||
Intron_number | 1/13 | |||||||
Y39A3B.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5a.1:c.-14+469A>G | |||||||
Intron_number | 1/14 | |||||||
Method | WGS_Flibotte |