WormBase Tree Display for Variation: WBVar01900870
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WBVar01900870 | Name | Public_name | WBVar01900870 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00616395 | |||||||
Y54G2A.17b.1:c.1428+70A>T | ||||||||
Y54G2A.17a.1:c.1368+70A>T | ||||||||
Y54G2A.17a.3:c.1368+70A>T | ||||||||
Y54G2A.17a.2:c.1368+70A>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2875125T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TTTTTTTTTGAAATTTTAACTTTTTCCCAA | TTTTTTTTTAAATTTCTTCAAAATTCTCGG | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2875123 | 2875123 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.3:c.1368+70A>T | |||||||
Intron_number | 5/7 | |||||||
Y54G2A.17b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.1428+70A>T | |||||||
Intron_number | 6/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.1368+70A>T | |||||||
Intron_number | 6/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.1368+70A>T | |||||||
Intron_number | 6/8 | |||||||
Method | WGS_Flibotte |