WormBase Tree Display for Variation: WBVar01913406
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WBVar01913406 | Name | Public_name | WBVar01913406 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00629536 | |||||||
Y37E11C.1b.1:c.885A>C | ||||||||
CE31639:p.Glu139Asp | ||||||||
Y37E11C.1c.1:c.417A>C | ||||||||
CE21557:p.Glu470Asp | ||||||||
Y37E11C.1a.1:c.1410A>C | ||||||||
CE31638:p.Glu295Asp | ||||||||
HGVSg | CHROMOSOME_IV:g.3523294A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | M57 | ||||
Flanking_sequences | GCAAGAAATGTCGGAGCTCGTGAAAAACGA | GGAATCAATAGTTTTGTGCTCGACGGTGTC | ||||||
Mapping_target | M57 | |||||||
Source_location | 225 | CHROMOSOME_IV | 3523291 | 3523291 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006769 | ||||||
Transcript | Y37E11C.1c.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.1 | tolerated | ||||||
PolyPhen | 0.015 | benign | ||||||
HGVSc | Y37E11C.1c.1:c.417A>C | |||||||
HGVSp | CE31639:p.Glu139Asp | |||||||
cDNA_position | 417 | |||||||
CDS_position | 417 | |||||||
Protein_position | 139 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | gaA/gaC | |||||||
Amino_acid_change | E/D | |||||||
Y37E11C.1b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.14 | tolerated | ||||||
PolyPhen | 0.015 | benign | ||||||
HGVSc | Y37E11C.1b.1:c.885A>C | |||||||
HGVSp | CE31638:p.Glu295Asp | |||||||
cDNA_position | 885 | |||||||
CDS_position | 885 | |||||||
Protein_position | 295 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | gaA/gaC | |||||||
Amino_acid_change | E/D | |||||||
Y37E11C.1a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.08 | tolerated | ||||||
PolyPhen | 0.001 | benign | ||||||
HGVSc | Y37E11C.1a.1:c.1410A>C | |||||||
HGVSp | CE21557:p.Glu470Asp | |||||||
cDNA_position | 1410 | |||||||
CDS_position | 1410 | |||||||
Protein_position | 470 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | gaA/gaC | |||||||
Amino_acid_change | E/D | |||||||
Method | WGS_Flibotte |