WormBase Tree Display for Variation: WBVar01922184
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WBVar01922184 | Name | Public_name | WBVar01922184 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00640594 | |||||||
Y94H6A.2.1:c.506del | ||||||||
CE49033:p.Lys170AsnfsTer5 | ||||||||
HGVSg | CHROMOSOME_IV:g.2731024del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||||
Flanking_sequences | GTGATCCTCTTCGACCAACGGAAACTTTTG | AAAATGGAGAAAAATAATCGACGGAGTGCT | ||||||
Mapping_target | Y94H6A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2731022 | 2731022 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022375 | ||||||
Transcript | Y94H6A.2.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y94H6A.2.1:c.506del | |||||||
HGVSp | CE49033:p.Lys170AsnfsTer5 | |||||||
cDNA_position | 506 | |||||||
CDS_position | 506 | |||||||
Protein_position | 169 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gAa/ga | |||||||
Amino_acid_change | E/X | |||||||
Method | WGS_Flibotte |