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WormBase Tree Display for Variation: WBVar01922319

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Name Class

WBVar01922319NamePublic_nameWBVar01922319
Other_namecewivar00640729
Y54G2A.17a.3:c.830-5del
Y54G2A.17a.2:c.830-5del
Y54G2A.17b.1:c.890-5del
Y54G2A.17a.1:c.830-5del
HGVSgCHROMOSOME_IV:g.2879616del
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAGTGTCTATTAGAGCGAGGAATGTATCTGGATTTTTTTTTTTTGATAAAATTTCGAAAAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28796142879614From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY54G2A.17a.3:c.830-5del
Intron_number3/7
Y54G2A.17b.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY54G2A.17b.1:c.890-5del
Intron_number4/7
Y54G2A.17a.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY54G2A.17a.2:c.830-5del
Intron_number4/8
Y54G2A.17a.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY54G2A.17a.1:c.830-5del
Intron_number4/8
MethodWGS_Flibotte