WormBase Tree Display for Variation: WBVar01922319
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WBVar01922319 | Name | Public_name | WBVar01922319 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00640729 | |||||||
Y54G2A.17a.3:c.830-5del | ||||||||
Y54G2A.17a.2:c.830-5del | ||||||||
Y54G2A.17b.1:c.890-5del | ||||||||
Y54G2A.17a.1:c.830-5del | ||||||||
HGVSg | CHROMOSOME_IV:g.2879616del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AGTGTCTATTAGAGCGAGGAATGTATCTGG | ATTTTTTTTTTTTGATAAAATTTCGAAAAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2879614 | 2879614 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.3:c.830-5del | |||||||
Intron_number | 3/7 | |||||||
Y54G2A.17b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17b.1:c.890-5del | |||||||
Intron_number | 4/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.2:c.830-5del | |||||||
Intron_number | 4/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.1:c.830-5del | |||||||
Intron_number | 4/8 | |||||||
Method | WGS_Flibotte |