WormBase Tree Display for Variation: WBVar01922329
expand all nodes | collapse all nodes | view schema
WBVar01922329 | Name | Public_name | WBVar01922329 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00640739 | |||||||
Y54G2A.17a.2:c.-39+1317_-39+1319del | ||||||||
Y54G2A.17a.1:c.-38-1577_-38-1575del | ||||||||
Y54G2A.17b.1:c.22+1317_22+1319del | ||||||||
HGVSg | CHROMOSOME_IV:g.2883916_2883918del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | ACATTTTTGTGTGCAAGAAAATAAAAAAAG | ACCTATTCGAGATGTTTGATGTTTGACTTT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2883914 | 2883916 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (12) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.22+1317_22+1319del | |||||||
Intron_number | 2/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.-39+1317_-39+1319del | |||||||
Intron_number | 1/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.-38-1577_-38-1575del | |||||||
Intron_number | 1/8 | |||||||
Method | WGS_Flibotte |