WormBase Tree Display for Variation: WBVar01944444
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WBVar01944444 | Name | Public_name | WBVar01944444 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00665906 | |||||||
F53A3.4d.1:c.-1672+1369_-1672+1370insCTTCTTCTT | ||||||||
F53A3.4a.1:c.3195+3965_3195+3966insCTTCTTCTT | ||||||||
F53A3.4c.1:c.3195+3965_3195+3966insCTTCTTCTT | ||||||||
F53A3.4b.1:c.3195+3965_3195+3966insCTTCTTCTT | ||||||||
HGVSg | CHROMOSOME_III:g.1921269_1921270insCTTCTTCTT | |||||||
Sequence_details | SMap | S_parent | Sequence | B0524 | ||||
Flanking_sequences | TGCCCGGCCGTCTCTTTTTAGTCTCCTCGC | CTTCTTCTTCTTCTTCTTCTTCTTCCTCCT | ||||||
Mapping_target | B0524 | |||||||
Source_location | 225 | CHROMOSOME_III | 1921260 | 1921261 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CTTCTTCTT | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004128 | ||||||
Transcript | F53A3.4d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4d.1:c.-1672+1369_-1672+1370insCTTCTTCTT | |||||||
Intron_number | 1/11 | |||||||
F53A3.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4c.1:c.3195+3965_3195+3966insCTTCTTCTT | |||||||
Intron_number | 14/16 | |||||||
F53A3.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4b.1:c.3195+3965_3195+3966insCTTCTTCTT | |||||||
Intron_number | 14/23 | |||||||
F53A3.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4a.1:c.3195+3965_3195+3966insCTTCTTCTT | |||||||
Intron_number | 15/23 | |||||||
Method | WGS_Flibotte |