WormBase Tree Display for Variation: WBVar01944989
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WBVar01944989 | Name | Public_name | WBVar01944989 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00666510 | |||||||
H39E23.2.1:c.563_565-3del | ||||||||
HGVSg | CHROMOSOME_V:g.14111860_14111905del | |||||||
Sequence_details | SMap | S_parent | Sequence | H39E23 | ||||
Flanking_sequences | GTGAACCGAATTTTCTACCGATATTTAAAG | AGCATCAAGATTCTCGTATGTTCAATTTGG | ||||||
Mapping_target | H39E23 | |||||||
Source_location | 225 | CHROMOSOME_V | 14111845 | 14111890 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010432 | ||||||
Transcript | H39E23.2.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | H39E23.2.1:c.563_565-3del | |||||||
cDNA_position | 582-? | |||||||
CDS_position | 563-? | |||||||
Protein_position | 188-? | |||||||
Intron_number | 5/6 | |||||||
Exon_number | 5/7 | |||||||
Method | WGS_Flibotte |