WormBase Tree Display for Variation: WBVar01953584
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WBVar01953584 | Name | Public_name | WBVar01953584 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00676074 | |||||||
CE48969:p.Phe96LeufsTer9 | ||||||||
Y94H6A.5b.1:c.288del | ||||||||
Y94H6A.5a.1:c.*19del | ||||||||
HGVSg | CHROMOSOME_IV:g.2689012del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||||
Flanking_sequences | AAAAATCAACAAAAACTTCCAAAAAATAAC | AAAAAAAAAATCAAAAAATCAACGCCGGTT | ||||||
Mapping_target | Y94H6A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2689010 | 2689010 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (17) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022378 | ||||||
Transcript | Y94H6A.5a.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y94H6A.5a.1:c.*19del | |||||||
cDNA_position | 2504 | |||||||
Exon_number | 17/17 | |||||||
Y94H6A.5b.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | Y94H6A.5b.1:c.288del | |||||||
HGVSp | CE48969:p.Phe96LeufsTer9 | |||||||
cDNA_position | 288 | |||||||
CDS_position | 288 | |||||||
Protein_position | 96 | |||||||
Exon_number | 2/2 | |||||||
Codon_change | ttT/tt | |||||||
Amino_acid_change | F/X | |||||||
Method | WGS_Flibotte |