WormBase Tree Display for Variation: WBVar01954805
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WBVar01954805 | Name | Public_name | WBVar01954805 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00677298 | |||||||
F16H9.1a.1:c.-154del | ||||||||
F16H9.2b.1:c.35-14626del | ||||||||
F16H9.2a.1:c.-23-14626del | ||||||||
F16H9.1b.1:c.84-3710del | ||||||||
HGVSg | CHROMOSOME_X:g.12721929del | |||||||
Sequence_details | SMap | S_parent | Sequence | F16H9 | ||||
Flanking_sequences | TATATTTTGCATTGATTCCAAAAAGCCCTG | CCCCTATTTTCTTCTACTTCATCATCGTCA | ||||||
Mapping_target | F16H9 | |||||||
Source_location | 225 | CHROMOSOME_X | 12721858 | 12721858 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008901 | ||||||
WBGene00004345 | ||||||||
Transcript | F16H9.1a.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1a.1:c.-154del | |||||||
cDNA_position | 119 | |||||||
Exon_number | 1/7 | |||||||
F16H9.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2b.1:c.35-14626del | |||||||
Intron_number | 1/3 | |||||||
F16H9.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2a.1:c.-23-14626del | |||||||
Intron_number | 1/4 | |||||||
F16H9.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1b.1:c.84-3710del | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |