WormBase Tree Display for Variation: WBVar01977227
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WBVar01977227 | Name | Public_name | WBVar01977227 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00703285 | |||||||
Y59A8B.1a.1:c.1045_1053del | ||||||||
CE26205:p.Ser349_Ala351del | ||||||||
HGVSg | CHROMOSOME_V:g.17945876_17945884del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | CGATGCATCCTGAACCATCGGTGGCGATGC | TGCTGCTGATGCTCTAAGATCTGGTGGCAC | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 17945850 | 17945858 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001080 | ||||||
Transcript | Y59A8B.1a.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y59A8B.1a.1:c.1045_1053del | |||||||
HGVSp | CE26205:p.Ser349_Ala351del | |||||||
cDNA_position | 1210-1218 | |||||||
CDS_position | 1045-1053 | |||||||
Protein_position | 349-351 | |||||||
Exon_number | 7/13 | |||||||
Codon_change | TCAGCAGCA/- | |||||||
Amino_acid_change | SAA/- | |||||||
Method | WGS_Flibotte |