WormBase Tree Display for Variation: WBVar01980583
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WBVar01980583 | Name | Public_name | WBVar01980583 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00706662 | |||||||
CE33809:p.Asn452LysfsTer? | ||||||||
R08E3.3a.1:c.1355_1356del | ||||||||
R08E3.3b.1:c.1278+77_1278+78del | ||||||||
HGVSg | CHROMOSOME_X:g.4820804_4820805del | |||||||
Sequence_details | SMap | S_parent | Sequence | R08E3 | ||||
Flanking_sequences | CTGTTTTAGAAGGGTCTTCCATGGAAAAAA | AAAATAAAATAAAATAAAACTTTCAGAAGA | ||||||
Mapping_target | R08E3 | |||||||
Source_location | 225 | CHROMOSOME_X | 4820774 | 4820775 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019959 | ||||||
Transcript | R08E3.3b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R08E3.3b.1:c.1278+77_1278+78del | |||||||
Intron_number | 11/13 | |||||||
R08E3.3a.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | R08E3.3a.1:c.1355_1356del | |||||||
HGVSp | CE33809:p.Asn452LysfsTer? | |||||||
cDNA_position | 1374-1375 | |||||||
CDS_position | 1355-1356 | |||||||
Protein_position | 452 | |||||||
Exon_number | 11/11 | |||||||
Codon_change | aAT/a | |||||||
Amino_acid_change | N/X | |||||||
Method | WGS_Flibotte |