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WormBase Tree Display for Variation: WBVar01980583

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Name Class

WBVar01980583NamePublic_nameWBVar01980583
Other_namecewivar00706662
CE33809:p.Asn452LysfsTer?
R08E3.3a.1:c.1355_1356del
R08E3.3b.1:c.1278+77_1278+78del
HGVSgCHROMOSOME_X:g.4820804_4820805del
Sequence_detailsSMapS_parentSequenceR08E3
Flanking_sequencesCTGTTTTAGAAGGGTCTTCCATGGAAAAAAAAAATAAAATAAAATAAAACTTTCAGAAGA
Mapping_targetR08E3
Source_location225CHROMOSOME_X48207744820775From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00019959
TranscriptR08E3.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.3b.1:c.1278+77_1278+78del
Intron_number11/13
R08E3.3a.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScR08E3.3a.1:c.1355_1356del
HGVSpCE33809:p.Asn452LysfsTer?
cDNA_position1374-1375
CDS_position1355-1356
Protein_position452
Exon_number11/11
Codon_changeaAT/a
Amino_acid_changeN/X
MethodWGS_Flibotte