WormBase Tree Display for Variation: WBVar01992541
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WBVar01992541 | Name | Public_name | WBVar01992541 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00719290 | |||||||
F43C9.2b.1:c.299-189del | ||||||||
F43C9.2a.1:c.344-189del | ||||||||
F43C9.9:n.17del | ||||||||
HGVSg | CHROMOSOME_X:g.4789825del | |||||||
Sequence_details | SMap | S_parent | Sequence | F43C9 | ||||
Flanking_sequences | GCCAGCGAGCGAGCAAAGCAAAAAAAATCG | AAAAAAAAAGAAAAAGATAGGGGGAAAATT | ||||||
Mapping_target | F43C9 | |||||||
Source_location | 225 | CHROMOSOME_X | 4789795 | 4789795 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (13) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018376 | ||||||
WBGene00202168 | ||||||||
Transcript | F43C9.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F43C9.2a.1:c.344-189del | |||||||
Intron_number | 4/5 | |||||||
F43C9.9 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F43C9.9:n.17del | |||||||
cDNA_position | 17 | |||||||
Exon_number | 1/1 | |||||||
F43C9.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F43C9.2b.1:c.299-189del | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |