WormBase Tree Display for Variation: WBVar02007490
expand all nodes | collapse all nodes | view schema
WBVar02007490 | Name | Public_name | WBVar02007490 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00735170 | |||||||
F53A3.4d.3:c.-979-23_-979-22insACAA | ||||||||
F53A3.4d.2:c.-1030-23_-1030-22insACAA | ||||||||
F53A3.4a.1:c.3837-23_3837-22insACAA | ||||||||
F53A3.4c.1:c.3837-23_3837-22insACAA | ||||||||
F53A3.4b.1:c.3837-23_3837-22insACAA | ||||||||
F53A3.4d.1:c.-1030-23_-1030-22insACAA | ||||||||
HGVSg | CHROMOSOME_III:g.1930715_1930716insACAA | |||||||
Sequence_details | SMap | S_parent | Sequence | F53A3 | ||||
Flanking_sequences | TTGAAAATCGAAGTGAAATTTCACGAAAAT | TACAAATTTTTGATTTTTTCAGAGCAATGA | ||||||
Mapping_target | F53A3 | |||||||
Source_location | 225 | CHROMOSOME_III | 1930706 | 1930707 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ACAA | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00305433 | ||||||
WBGene00004128 | ||||||||
Transcript | F53A3.4d.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4d.2:c.-1030-23_-1030-22insACAA | |||||||
Intron_number | 2/10 | |||||||
F53A3.4d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4d.1:c.-1030-23_-1030-22insACAA | |||||||
Intron_number | 3/11 | |||||||
F53A3.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4c.1:c.3837-23_3837-22insACAA | |||||||
Intron_number | 16/16 | |||||||
F53A3.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4b.1:c.3837-23_3837-22insACAA | |||||||
Intron_number | 16/23 | |||||||
F53A3.12 | ||||||||
F53A3.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4a.1:c.3837-23_3837-22insACAA | |||||||
Intron_number | 17/23 | |||||||
F53A3.4d.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A3.4d.3:c.-979-23_-979-22insACAA | |||||||
Intron_number | 2/10 | |||||||
Method | WGS_Flibotte |