WormBase Tree Display for Variation: WBVar02020182
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WBVar02020182 | Name | Public_name | WBVar02020182 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00748690 | |||||||
Y54G2A.45b.1:c.388-42_388-40del | ||||||||
Y54G2A.45a.1:c.742-42_742-40del | ||||||||
HGVSg | CHROMOSOME_IV:g.2807813_2807815del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TAGACCACCTCACTTCCAAAGCGAACAACT | CTCCTAGATGACCTTTAAAAATGTTACGAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2807811 | 2807813 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044488 | ||||||
Transcript | Y54G2A.45b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.45b.1:c.388-42_388-40del | |||||||
Intron_number | 2/3 | |||||||
Y54G2A.45a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.45a.1:c.742-42_742-40del | |||||||
Intron_number | 7/9 | |||||||
Method | WGS_Flibotte |