WormBase Tree Display for Variation: WBVar02020195
expand all nodes | collapse all nodes | view schema
WBVar02020195 | Name | Public_name | WBVar02020195 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00748703 | |||||||
Y54G2A.8a.1:c.*166del | ||||||||
Y54G2A.7.1:c.-25del | ||||||||
HGVSg | CHROMOSOME_IV:g.2838681del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TCTCTATTTTCATTCCAAATTCACACACTA | TTCTCAATACTTCAGTTGTTCCAAATGAAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2838679 | 2838679 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00043702 | ||||||
WBGene00021873 | ||||||||
Transcript | Y54G2A.8a.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.8a.1:c.*166del | |||||||
cDNA_position | 1577 | |||||||
Exon_number | 12/12 | |||||||
Y54G2A.7.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.7.1:c.-25del | |||||||
cDNA_position | 74 | |||||||
Exon_number | 1/5 | |||||||
Method | WGS_Flibotte |