WormBase Tree Display for Variation: WBVar02030031
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WBVar02030031 | Name | Public_name | WBVar02030031 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00758600 | |||||||
F30H5.1.1:c.344+526_344+531del | ||||||||
F30H5.6:n.109_114del | ||||||||
F30H5.7:n.316_321del | ||||||||
HGVSg | CHROMOSOME_III:g.492515_492520del | |||||||
Sequence_details | SMap | S_parent | Sequence | F30H5 | ||||
Flanking_sequences | AATTTTTTTTTCAAAATTTGAGGAGGTTGG | TAAATATTTAGCAGACCCAAGGAAAAATATTTAGCAGACCAAAGATAGGTATGCTAAATACTTAGCAGAC | ||||||
Mapping_target | F30H5 | |||||||
Source_location | 225 | CHROMOSOME_III | 492513 | 492518 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00198513 | ||||||
WBGene00006781 | ||||||||
WBGene00197590 | ||||||||
Transcript | F30H5.7 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F30H5.7:n.316_321del | |||||||
cDNA_position | 316-321 | |||||||
Exon_number | 1/1 | |||||||
F30H5.6 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F30H5.6:n.109_114del | |||||||
cDNA_position | 109-114 | |||||||
Exon_number | 1/1 | |||||||
F30H5.1.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F30H5.1.1:c.344+526_344+531del | |||||||
Intron_number | 4/12 | |||||||
Method | WGS_Flibotte |