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WormBase Tree Display for Variation: WBVar02046884

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Name Class

WBVar02046884NamePublic_nameWBVar02046884
Other_namecewivar00776033
R08E3.3a.1:c.1365_1366del
R08E3.3b.1:c.1278+87_1278+88del
CE33809:p.Lys456LysfsTer?
HGVSgCHROMOSOME_X:g.4820814_4820815del
Sequence_detailsSMapS_parentSequenceR08E3
Flanking_sequencesAGGGTCTTCCATGGAAAAAAATAAAATAAAAAAATAAAACTTTCAGAAGAATTTTCAGTA
Mapping_targetR08E3
Source_location225CHROMOSOME_X48207844820785From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022856From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00019959
TranscriptR08E3.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.3b.1:c.1278+87_1278+88del
Intron_number11/13
R08E3.3a.1VEP_consequenceframeshift_variant,stop_lost
VEP_impactHIGH
HGVScR08E3.3a.1:c.1365_1366del
HGVSpCE33809:p.Lys456LysfsTer?
cDNA_position1384-1385
CDS_position1365-1366
Protein_position455-456
Exon_number11/11
Codon_changeaaATaa/aaaa
Amino_acid_changeK*/KX
MethodWGS_Flibotte