WormBase Tree Display for Variation: WBVar02046884
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WBVar02046884 | Name | Public_name | WBVar02046884 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00776033 | |||||||
R08E3.3a.1:c.1365_1366del | ||||||||
R08E3.3b.1:c.1278+87_1278+88del | ||||||||
CE33809:p.Lys456LysfsTer? | ||||||||
HGVSg | CHROMOSOME_X:g.4820814_4820815del | |||||||
Sequence_details | SMap | S_parent | Sequence | R08E3 | ||||
Flanking_sequences | AGGGTCTTCCATGGAAAAAAATAAAATAAA | AAAATAAAACTTTCAGAAGAATTTTCAGTA | ||||||
Mapping_target | R08E3 | |||||||
Source_location | 225 | CHROMOSOME_X | 4820784 | 4820785 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019959 | ||||||
Transcript | R08E3.3b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R08E3.3b.1:c.1278+87_1278+88del | |||||||
Intron_number | 11/13 | |||||||
R08E3.3a.1 | VEP_consequence | frameshift_variant,stop_lost | ||||||
VEP_impact | HIGH | |||||||
HGVSc | R08E3.3a.1:c.1365_1366del | |||||||
HGVSp | CE33809:p.Lys456LysfsTer? | |||||||
cDNA_position | 1384-1385 | |||||||
CDS_position | 1365-1366 | |||||||
Protein_position | 455-456 | |||||||
Exon_number | 11/11 | |||||||
Codon_change | aaATaa/aaaa | |||||||
Amino_acid_change | K*/KX | |||||||
Method | WGS_Flibotte |