WormBase Tree Display for Variation: WBVar02081641
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WBVar02081641 | Name | Public_name | WBVar02081641 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00811252 | |||||||
CE44055:p.Ala1834_Gln1839dup | ||||||||
F53A3.4d.3:c.621_622insGCCCAAGCCCAAGCCCAA | ||||||||
F53A3.4d.2:c.621_622insGCCCAAGCCCAAGCCCAA | ||||||||
F53A3.4a.1:c.5382_5383insGCCCAAGCCCAAGCCCAA | ||||||||
F53A3.4b.1:c.5487_5488insGCCCAAGCCCAAGCCCAA | ||||||||
CE44019:p.Ala1799_Gln1804dup | ||||||||
F53A3.4d.1:c.621_622insGCCCAAGCCCAAGCCCAA | ||||||||
CE48496:p.Ala212_Gln217dup | ||||||||
HGVSg | CHROMOSOME_III:g.1937749_1937750insGCCCAAGCCCAAGCCCAA | |||||||
Sequence_details | SMap | S_parent | Sequence | F53A3 | ||||
Flanking_sequences | GCCGCAAGCCTTCCCTATCAGCTACAACTG | GCCCAAGCCCAAGCCCAAGCCCAAGCCCAACAGGCCCCGC | ||||||
Mapping_target | F53A3 | |||||||
Source_location | 225 | CHROMOSOME_III | 1937740 | 1937741 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GCCCAAGCCCAAGCCCAA | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004128 | ||||||
Transcript | F53A3.4d.2 | VEP_consequence | inframe_insertion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F53A3.4d.2:c.621_622insGCCCAAGCCCAAGCCCAA | |||||||
HGVSp | CE48496:p.Ala212_Gln217dup | |||||||
cDNA_position | 2298-2299 | |||||||
CDS_position | 621-622 | |||||||
Protein_position | 207-208 | |||||||
Exon_number | 9/11 | |||||||
Codon_change | -/GCCCAAGCCCAAGCCCAA | |||||||
Amino_acid_change | -/AQAQAQ | |||||||
F53A3.4d.1 | VEP_consequence | inframe_insertion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F53A3.4d.1:c.621_622insGCCCAAGCCCAAGCCCAA | |||||||
HGVSp | CE48496:p.Ala212_Gln217dup | |||||||
cDNA_position | 2622-2623 | |||||||
CDS_position | 621-622 | |||||||
Protein_position | 207-208 | |||||||
Exon_number | 10/12 | |||||||
Codon_change | -/GCCCAAGCCCAAGCCCAA | |||||||
Amino_acid_change | -/AQAQAQ | |||||||
F53A3.4b.1 | VEP_consequence | inframe_insertion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F53A3.4b.1:c.5487_5488insGCCCAAGCCCAAGCCCAA | |||||||
HGVSp | CE44055:p.Ala1834_Gln1839dup | |||||||
cDNA_position | 5487-5488 | |||||||
CDS_position | 5487-5488 | |||||||
Protein_position | 1829-1830 | |||||||
Exon_number | 22/24 | |||||||
Codon_change | -/GCCCAAGCCCAAGCCCAA | |||||||
Amino_acid_change | -/AQAQAQ | |||||||
F53A3.4a.1 | VEP_consequence | inframe_insertion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F53A3.4a.1:c.5382_5383insGCCCAAGCCCAAGCCCAA | |||||||
HGVSp | CE44019:p.Ala1799_Gln1804dup | |||||||
cDNA_position | 5391-5392 | |||||||
CDS_position | 5382-5383 | |||||||
Protein_position | 1794-1795 | |||||||
Exon_number | 22/24 | |||||||
Codon_change | -/GCCCAAGCCCAAGCCCAA | |||||||
Amino_acid_change | -/AQAQAQ | |||||||
F53A3.4d.3 | VEP_consequence | inframe_insertion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F53A3.4d.3:c.621_622insGCCCAAGCCCAAGCCCAA | |||||||
HGVSp | CE48496:p.Ala212_Gln217dup | |||||||
cDNA_position | 2243-2244 | |||||||
CDS_position | 621-622 | |||||||
Protein_position | 207-208 | |||||||
Exon_number | 9/11 | |||||||
Codon_change | -/GCCCAAGCCCAAGCCCAA | |||||||
Amino_acid_change | -/AQAQAQ | |||||||
Method | WGS_Flibotte |