WormBase Tree Display for Variation: WBVar02081682
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WBVar02081682 | Name | Public_name | WBVar02081682 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00811293 | |||||||
Y39A1A.21a.1:c.520-202_520-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | ||||||||
Y39A1A.21c.1:c.169-202_169-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | ||||||||
Y39A1A.21a.2:c.520-202_520-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | ||||||||
HGVSg | CHROMOSOME_III:g.10700995_10701047delinsTTTAATAGAAAATTTCAATGTTTAGAAAACTTCGAATTCTCC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39A1A | ||||
Flanking_sequences | ATTTGAGAACTTTTTAAGCATAAATTTTTT | AAAAAAACATTTTTTAAAGGATTTTTTTTT | ||||||
Mapping_target | Y39A1A | |||||||
Source_location | 225 | CHROMOSOME_III | 10700896 | 10700948 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTTAATAGAAAATTTCAATGTTTAGAAAACTTCGAATTCTCC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012658 | ||||||
Transcript | Y39A1A.21a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.21a.1:c.520-202_520-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | |||||||
Intron_number | 5/6 | |||||||
Y39A1A.21a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.21a.2:c.520-202_520-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | |||||||
Intron_number | 4/5 | |||||||
Y39A1A.21c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A1A.21c.1:c.169-202_169-150delinsGGAGAATTCGAAGTTTTCTAAACATTGAAATTTTCTATTAAA | |||||||
Intron_number | 2/3 | |||||||
Method | WGS_Flibotte |