WormBase Tree Display for Variation: WBVar02082214
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WBVar02082214 | Name | Public_name | WBVar02082214 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00811845 | |||||||
Y54G2A.12.1:c.57_59delinsAAATCAGCTTC | ||||||||
CE41063:p.Met19IlefsTer35 | ||||||||
HGVSg | CHROMOSOME_IV:g.2782766_2782768delinsGAAGCTGATTT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AATGCCGATGATTTCCCTTTTGCGATCTGA | ATACTGACGTCATTATCTGAGTGTTCACTG | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2782764 | 2782766 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GAAGCTGATTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021877 | ||||||
Transcript | Y54G2A.12.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y54G2A.12.1:c.57_59delinsAAATCAGCTTC | |||||||
HGVSp | CE41063:p.Met19IlefsTer35 | |||||||
cDNA_position | 76-78 | |||||||
CDS_position | 57-59 | |||||||
Protein_position | 19-20 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | atGGAt/atAAATCAGCTTCt | |||||||
Amino_acid_change | MD/INQLX | |||||||
Method | WGS_Flibotte |