WormBase Tree Display for Variation: WBVar02082222
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WBVar02082222 | Name | Public_name | WBVar02082222 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00811854 | |||||||
Y54G2A.15.1:c.156+16_156+19delinsCGCT | ||||||||
Y54G2A.33.2:c.214+1055_214+1058delinsAGCG | ||||||||
Y54G2A.33.1:c.214+1055_214+1058delinsAGCG | ||||||||
HGVSg | CHROMOSOME_IV:g.2843743_2843746delinsAGCG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AAAAACATAGGCGGTGCGTTGCGGTCGCGT | GTCAAATTATTTTACCATCCAAGTATAAGC | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2843741 | 2843744 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | AGCG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (12) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021880 | ||||||
WBGene00021895 | ||||||||
Transcript | Y54G2A.33.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.33.1:c.214+1055_214+1058delinsAGCG | |||||||
Intron_number | 2/4 | |||||||
Y54G2A.33.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.33.2:c.214+1055_214+1058delinsAGCG | |||||||
Intron_number | 2/3 | |||||||
Y54G2A.15.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.15.1:c.156+16_156+19delinsCGCT | |||||||
Intron_number | 3/6 | |||||||
Method | WGS_Flibotte |