WormBase Tree Display for Variation: WBVar02082262
expand all nodes | collapse all nodes | view schema
WBVar02082262 | Name | Public_name | WBVar02082262 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00811895 | |||||||
Y54G2A.50.3:c.*369_*398delinsTTAACTTTTCTGTAATAAAAATTATAATTT | ||||||||
HGVSg | CHROMOSOME_IV:g.2919747_2919776delinsTTAACTTTTCTGTAATAAAAATTATAATTT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | ATTGATTTCTCATTGTAGATGTTTTTTTTT | AGAAAATGTCGCGTGATCCGAACATTTCTA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2919745 | 2919774 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTAACTTTTCTGTAATAAAAATTATAATTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044493 | ||||||
Transcript | Y54G2A.50.3 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.50.3:c.*369_*398delinsTTAACTTTTCTGTAATAAAAATTATAATTT | |||||||
cDNA_position | 1198-1228 | |||||||
Exon_number | 8/8 | |||||||
Method | WGS_Flibotte |